PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.T2F1D
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 325aa    MW: 36940.6 Da    PI: 5.8752
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.T2F1DgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81e-0797146248
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 
                      + WT eE + +  +++         +W++Ia++++ g+t+ q+++r+ k++
      Aradu.T2F1D  97 QVWTWEENKAFESVITNCFEYakrnSWELIAARLP-GKTPAQLQERFKKLM 146
                      68*************9875447779**********.************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007172.4E-695148IPR001005SANT/Myb domain
SuperFamilySSF466897.18E-897153IPR009057Homeodomain-like
CDDcd001671.43E-699146No hitNo description
PROSITE profilePS500906.99299146IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.1E-7110147IPR009057Homeodomain-like
SMARTSM0071760246292IPR001005SANT/Myb domain
SuperFamilySSF466891.94E-7254295IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MSEEELGTFS MMDPLDMIDP WDMIDWDADR RNMVEQCAID VGGNQPPQPK PQPDVREITV  60
AQFFSDTCGN PQFDMFLADC GYQLPESQLQ LQPMQPQVWT WEENKAFESV ITNCFEYAKR  120
NSWELIAARL PGKTPAQLQE RFKKLMKDIN VIHNGYTSNT PLNTASENMT MIMAAPITTL  180
EHNPVSVPII NATTTTPPPP PYNTDHQHHR AEVVAAAAPM EAATREQSQS ANTNNTKKYS  240
RLSTIYKSNI PLLLFVRGYQ AEGTNWSRIS KYYVKTRTYH QISSHAQKYF RHKERLAKGE  300
KLRKSIYDFS GLDGNAEGDG ELVSI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015941215.10.0PREDICTED: transcription factor DIVARICATA isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1908424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.16e-11MYB family protein